EvoLudoLab: Fixation times on the linear chain graph: Difference between revisions

Latest revision as of 14:34, 12 August 2024

Color code:	Residents	Mutants
	New resident	New mutant

Payoff code:	Residents	Mutants

samples: 0

Avg. fix. time: Resident: 0.000 ± 0.000, Mutant: 0.000 ± 0.000, Absorbtion: 0.000 ± 0.000

Fixation times on the linear chain graph

The fixation time of mutants is zero for all vertices except for the root (vertex $0$ ) because the fixation probabilities are zero. For the root vertex the fixation time is proportional to $r N$ , the mutant's fitness $r$ times the length of the chain $N$ . The fixation time of residents (and because of the corresponding fixation probabilities also the absorption times) is zero for the root and linearly decreases with distance from the root. More specifically, the fixation time for a mutant in vertex $i$ is proportional to $N - i$ .

For the simulations, the population size is $N = 100$ , the fitness of residents is set to $1$ and that of mutants to $2$ . Hence the fixation time of the mutant in the root must be almost half the time until the residents reach fixation after a mutant occurred in the adjacent vertex $1$ . Similarly, the absorption time of vertex $1$ is almost twice that of the root vertex $0$ . As a reference, the fixation times for the corresponding original Moran process are indicated by a dark red line.

Data views

Strategies - Structure	Snapshot of the spatial arrangement of strategies.
Strategies - Structure 3D	3D view of snapshot of the spatial arrangement of strategies.
Strategies - Mean	Time evolution of the strategy frequencies.
Fitness - Structure	Snapshot of the spatial distribution of payoffs.
Fitness - Structure 3D	3D view of snapshot of the spatial distribution of payoffs.
Fitness - Mean	Time evolution of average population payoff bounded by the minimum and maximum individual payoff.
Fitness - Histogram	Snapshot of payoff distribution in population.
Structure - Degree	Degree distribution in structured populations.
Statistics - Fixation probability	Statistics of fixation probability for each vertex where the initial mutant arose.
Statistics - Fixation times	Statistics of conditional fixation times of residents and mutants as well as absorption time for each vertex where the initial mutant arose.
Console log	Message log from engine.

Game parameters

The list below describes only the few parameters related to the evolutionary dynamics of residents and mutants with fixed fitness (constant selection). Numerous other parameters are available to set population structures or update rules on the player as well as population level.

--fitness <r,m>: fitness of residents r and of mutants m.

@@ Line 1: / Line 1: @@
 {{EvoLudoLab:Moran|
-options="--game Moran --run --delay 50 --view Statistics_-_Fixation_time --reportfreq 0.5 --popupdate B --popsize 100 --geometry af --initfreqs 0:1 --mutation 0 --basefit 1 --selection 1 --resident 1 --mutant 2"|
+options="--module Moran --run --delay 50 --view Statistics_-_Fixation_time --timestep 0.5 --popupdate B --popsize 100 --geometry l0,1f --init mutant 1,0 --fitness 1,2"|
 title=Fixation times on the linear chain graph|
 doc=The fixation time of mutants is zero for all vertices except for the root (vertex  $0$ ) because the fixation probabilities are zero. For the root vertex the fixation time is proportional to  $r N$ , the mutant's fitness  $r$  times the length of the chain  $N$ . The fixation time of residents (and because of the corresponding fixation probabilities also the absorption times) is zero for the root and linearly decreases with distance from the root. More specifically, the fixation time for a mutant in vertex  $i$  is proportional to  $N - i$ .
-For the simulations, the population size is  $N = 100$ , the fitness of residents is set to  $1$  and that of mutants to  $2$ . Hence the fixation time of the mutant in the root must be almost half the time until the residents reach fixation after a mutant occurred in the adjacent vertex  $1$ . As a reference, the fixation times for the corresponding original [[Moran process]] are indicated by a dark red line.}}
+For the simulations, the population size is  $N = 100$ , the fitness of residents is set to  $1$  and that of mutants to  $2$ . Hence the fixation time of the mutant in the root must be almost half the time until the residents reach fixation after a mutant occurred in the adjacent vertex \(1\). Similarly, the absorption time of vertex  $1$  is almost twice that of the root vertex \(0\). As a reference, the fixation times for the corresponding original [[Moran process]] are indicated by a dark red line.}}